SCCM vs Intune - Simply Explained
SCCM (System Center Configuration Manager), now officially known as Microsoft Endpoint Configuration Manager (MECM), and Microsoft Intune are two of Microsoft's most important endpoint management solutions. While both help IT teams deploy software, manage devices, enforce security policies, and keep endpoints updated, they were built for completely different eras of IT. SCCM was designed for traditional on-premises corporate networks where everything lived inside the company's data center. Intune was built for today's cloud-first world, where employees work remotely, devices connect from anywhere, and management happens over the internet. Understanding these differences is essential when planning a modern endpoint management strategy.
SCCM: THE ON-PREMISES POWERHOUSE
SCCM has been the enterprise standard for Windows device management for more than two decades. Running on infrastructure that organizations build and maintain themselves, SCCM provides extremely deep control over Windows desktops and servers. IT administrators can deploy operating systems using task sequences, distribute complex applications with dependencies, manage software updates through Windows Server Update Services (WSUS), inventory hardware and software, generate highly detailed reports, and automate large-scale deployments across thousands of devices. While incredibly powerful, SCCM requires significant infrastructure including SQL Server, site servers, management points, distribution points, and experienced administrators to keep everything running smoothly.
INTUNE: THE MODERN CLOUD-NATIVE APPROACH
Microsoft Intune takes a completely different approach by moving endpoint management into the Microsoft cloud. There are no management servers to install, no SQL databases to maintain, and no distribution points to configure. Devices simply enroll over the internet and receive applications, security policies, compliance rules, and updates directly from Microsoft. Intune supports Windows, macOS, iOS, and Android from a single administration portal, making it ideal for organizations with remote employees, hybrid work, Bring Your Own Device (BYOD) programs, and globally distributed teams. Deep integration with Microsoft Entra ID, Conditional Access, Microsoft Defender, Windows Autopilot, and Microsoft 365 makes Intune a central component of Microsoft's Zero Trust security strategy.
SCCM VS INTUNE: WHICH IS BETTER?
The answer depends entirely on your environment. SCCM provides unmatched control for complex Windows deployments, server management, operating system imaging, advanced reporting, and highly customized application deployments. Intune excels in cloud-native device management, mobile device management, automated provisioning with Windows Autopilot, and managing users wherever they work. Organizations that primarily operate on-premises with large Windows environments often continue relying on SCCM, while businesses embracing cloud computing and remote work increasingly choose Intune as their primary management platform. Rather than replacing one another, both products complement different management scenarios and organizational requirements.
CO-MANAGEMENT: THE BEST OF BOTH WORLDS
Microsoft understands that most enterprises cannot migrate overnight, which is why Co-Management allows SCCM and Intune to manage the same device simultaneously. Organizations can gradually move workloads such as compliance policies, Windows updates, endpoint protection, and device configuration from SCCM into Intune while continuing to use SCCM for operating system deployment, server management, or complex software installations. This phased migration reduces risk, protects existing investments, and allows IT departments to modernize at their own pace without disrupting users or rebuilding their entire management infrastructure in one project.
WHICH SOLUTION SHOULD YOUR ORGANIZATION CHOOSE?
For organizations with highly customized Windows environments, large on-premises infrastructures, and advanced deployment requirements, SCCM remains one of the most capable endpoint management platforms available. For businesses adopting hybrid work, cloud-first infrastructure, mobile devices, and Microsoft 365, Intune represents the future of endpoint management. Many enterprises ultimately use both through Co-Management, combining SCCM's mature deployment capabilities with Intune's cloud-native flexibility and security. As Microsoft continues investing heavily in Intune and cloud management, understanding how both solutions work together has become increasingly important for every IT professional responsible for managing modern workplace devices.
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Today's topic is one that almost everyone has heard of,
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but most people get wrong.
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I'm talking about SCCM and Intune.
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You've probably heard both names thrown around,
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and it's easy to assume they're basically
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the same tool with different names,
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two Microsoft products that both manage devices, right?
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Well, not exactly, actually,
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they're two very different tools
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with different strengths, different philosophies
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and different infrastructure requirements.
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And picking the wrong one means you could waste time
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and money on infrastructure you don't need
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or miss the control you actually want.
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By the end of this episode,
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you'll understand what each tool actually does,
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how they compare side by side
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and which one makes sense for your organization.
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So grab your coffee and let's dive in.
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The core problem, managing devices at scale.
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Let's start with the problem, both tools are trying to solve.
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If you only have five computers in your office,
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you don't need either one.
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You can walk over and install software, run updates
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and fix things yourself and that works fine.
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But what happens with 500 computers or 5,000 or 50,000?
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The manual approach stops working very quickly.
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You can't have IT staff walking to every desk
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to install a security patch
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and you can't check each machine one by one
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for the right antivirus.
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It just doesn't scale.
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20 years ago, this was a huge problem for large organizations.
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IT teams had to physically visit machines,
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install software from CDs and run updates one at a time.
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That was slow, expensive and error prone.
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Microsoft looked at this problem and built two solutions,
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one for the old world where everything lived
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in your own building on your own servers
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and one for the new world, where devices are everywhere,
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users work remotely and the cloud handles the heavy lifting
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the first is SCCM and the second is in tune.
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They solve the same core problem, but in completely different ways.
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So before we compare them head to head,
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we need to understand what each one actually is.
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What is SCCM, the on-premises powerhouse?
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SCCM stands for System Center Configuration Manager.
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Though you might also hear it called
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Microsoft Endpoint Configuration Manager or MECM for short.
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That's the new name, but most people still call it SCCM.
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Here's the simplest definition.
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SCCM is an on-premises tool that you run on your own servers
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inside your own building on your own network.
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It's software you install and maintain yourself
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and it's been the go-to for large enterprises
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for over two decades.
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SCCM works using what's called an agent-based model.
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A small piece of software gets installed
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on every device you want to manage
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and that agent reports back to the SCCM server receives commands
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and carries out tasks.
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It's like having a tiny IT assistant living on each computer,
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waiting for instructions.
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So what can SCCM actually do?
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A lot.
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First, operating system deployment.
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You can push out windows to hundreds of new machines at once,
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saving days of manual effort, then software distribution.
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Install applications like Office or Chrome
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across your entire organization from one central console.
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It also handles patch management
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so you can roll out security updates
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on a schedule during maintenance windows
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with full control over timing and targeting.
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Compliance reporting shows which machines
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meet your security standards and which don't.
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An inventory gives you a complete picture
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of hardware and software across your environment.
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Large enterprises have relied on this tool
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for more than 20 years.
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It's mature, powerful, and gives IT teams
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deep granular control over Windows devices.
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Need to deploy a complex application
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with dependencies and custom scripts?
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SCCM can handle it.
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Need to image a hundred new laptops
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with a custom operating system build?
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That too.
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But here's the thing.
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SCCM requires serious infrastructure.
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You need domain controllers, SQL servers, site servers,
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distribution points, management points,
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and people who know how to set it all up
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and keep it running is not something you just turn on
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and forget about.
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And that's where it sibling comes in.
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A tool from Microsoft that takes a completely different approach.
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One that doesn't need any of that infrastructure at all.
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What is Intune?
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The Cloud Native Modern Tool.
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Now let's talk about the other option, Intune.
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Here's the simplest definition.
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It's a cloud-based service.
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No service to buy.
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No infrastructure to maintain.
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No SQL databases to manage.
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Everything runs inside Microsoft's Azure Data Centers.
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You sign in through a web browser, configure your policies,
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and you're done.
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Instead of the agent-based model, Intune
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uses a profile-based model.
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Devices enroll directly with the service
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over the internet, receive policies and configurations,
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and check in periodically to report their status.
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No agent software to install.
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No management points to configure.
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The device talks directly to the cloud.
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That's a big difference in scope.
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SCCM is primarily a Windows tool.
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It can manage some other platforms,
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but it's hard and soul is Windows.
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Intune, on the other hand, supports Windows, Mac OS, iOS,
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and Android.
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So if you have a mixed environment with iPhones
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for executives, Android tablets for field workers,
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and MacBooks for the design team,
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Intune can manage all of them from the same console.
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So what can Intune actually do?
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It handles device enrollment, uses
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can join their own devices, or IT can pre-configure them.
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It handles application deployment to Windows, Mac, iOS,
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and Android.
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Conditional access policies require devices
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to be compliant before they can access company data.
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Compliance policies define what a healthy device looks like
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and generate reports.
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And Windows update rings, let patches roll out
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in a controlled way, without needing WS/US or on-premises
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infrastructure.
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This is the direction Microsoft is investing in for the future.
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Almost every new feature in endpoint management
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is being built for Intune first.
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The cloud native approach is where development resources are
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going.
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So we've got two tools that both manage devices, one runs
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on your servers with agents, the other runs in the cloud
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with profiles.
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They're fundamentally different under the hood,
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and we're going to dig into what that actually means.
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On-premises versus cloud, the big difference.
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Actually, the big difference between SCCM and Intune
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comes down to just one thing--
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infrastructure.
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SCCM needs a lot of it.
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You need domain controllers for authentication,
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SQL servers to host the site database, site servers
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to run the core management role, distribution points
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to host content that devices download,
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and management points for client communication.
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Each of these is a separate server--
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or multiple servers, or running Windows server,
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consuming licenses requiring patches, needing backups.
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Intune needs one thing, an internet connection.
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That's it.
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No servers, no SQL databases, no distribution points,
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no management points.
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The infrastructure is Microsoft's problem, not yours.
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This difference shows up in every part of how these tools work.
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Take deployment methods.
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In SCCM, deploying a new operating system
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to a computer typically involves PXC boot.
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The device boots from the network,
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connects to a distribution point,
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and runs a task sequence that partitions the drive,
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installs Windows, applies settings, and installs applications.
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It's powerful, but it requires the device
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to be on the corporate network connected
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to the right infrastructure.
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Intune takes a completely different approach
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with Windows autopilot.
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A new laptop arrives from the manufacturer,
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already registered in your tenant.
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The user turns it on, connects to Wi-Fi,
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and signs in with their work credentials.
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From there, Windows configures itself automatically,
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applications install from the cloud, and policies apply.
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The device is ready to use in minutes, no imaging,
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no PXC boot, and no IT staff needed.
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Update management follows the same pattern.
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SCCM integrates with WSUS, Windows Server Update Services,
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to download and approve patches.
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You configure maintenance Windows,
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create deployment packages, target collections,
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and monitor compliance.
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It gives you deep control, but there are a lot of moving parts.
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Intune uses Windows Update for business.
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You create update rings, groups of devices
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with the same update settings, and decide
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how fast updates roll out when deadlines happen,
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and what features to defer.
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Devices check directly with Microsoft's update servers,
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no WSUS, no distribution points, no maintenance
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windows to configure, and security integration
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follows the same split.
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Intune connects natively with Azure Active Directory
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and conditional access.
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The device reports its compliance status.
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If it's not compliant, missing an update,
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no encryption, outdated antivirus,
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conditional access can block it from accessing email teams
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or SharePoint.
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It happens automatically in real time,
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without any on-premises infrastructure.
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SCCM has its own compliance engine.
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It can evaluate policies, generate reports, and remediate issues,
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but it doesn't integrate as seamlessly
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with cloud identity and access controls.
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You can make it work, but it takes more effort and more pieces.
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These differences aren't abstract.
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They matter depending on what you're actually trying to do.
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If your workforce is in one building,
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on the corporate network, with standardized Windows Desktops,
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SCCM's depth might be exactly what you need.
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But if your workforce is spread across the country,
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working from home on a mix of devices,
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Intune's cloud native approach starts to look
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a lot more practical.
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What each tool does best feature comparison.
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So let's put them side by side on the tasks
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I teams do every day.
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This is where the differences really show up.
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Start with application deployment.
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In SCCM, you have full control.
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You can create complex deployments with dependencies.
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Install this, then that, then check for a registry key
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before proceeding.
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You can schedule deployments for specific times,
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target specific collections, and configure superceedings
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so old versions get replaced automatically.
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If you need to deploy a line of business application
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with custom scripts and multiple MSI files, SCCM handles it,
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Intune can deploy applications too.
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Win32 apps, Microsoft Store Apps, line of business apps.
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But it's simpler.
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You upload the installer, configure detection rules,
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and assign it to a group.
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It works well for most common scenarios.
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But if you need deep orchestration and sequencing, SCCM still wins.
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Now OS deployment, this is where SCCM really shines.
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Task sequences let you do bare metal deployments.
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A blank hard drive becomes a fully configured Windows machine
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with applications, settings, and security policies.
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You can do in place upgrades from Windows 10 to Windows 11
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and customize every step of the process.
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Intune takes a different approach with Windows autopilot.
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The device arrives, the user signs in,
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and the cloud does the rest.
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It's faster, simpler, and works great for modern hardware.
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But if you need to re-image existing machines,
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handle complex upgrade scenarios
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or deploy custom Windows images, SCCM's task sequences
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are still the gold standard.
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Compliance in reporting is another area
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where the tools diverge.
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SCCM has SQL Server Reporting Services,
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so you can build custom reports on almost anything,
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which machines have a specific software,
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which are missing a critical update,
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what hardware configurations exist across your fleet.
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The reporting is deep and customizable,
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but it takes work to set up.
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Intune has cloud-based dashboards
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that are much easier to use.
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You can see compliance status at a glance,
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drill into specific devices and export reports.
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It's less customizable than SCCM,
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but for most organizations, it's enough.
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Mobile Device Management is Intune's territory.
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SCCM doesn't manage phones or tablets, period.
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If you have iPhones, Android devices, or iPads in your organization,
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Intune is the tool you need.
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It handles enrollment, app deployment, compliance policies,
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and remote wipe for mobile devices.
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SCCM simply can't do that.
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And Server Management goes the other way.
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SCCM handles servers, patching, monitoring, inventory,
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software deployment.
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It's built for it.
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Intune has some server support through Azure Arc,
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but it's limited.
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If you're managing Windows Server infrastructure,
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SCCM is still the right tool.
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So you can see the pattern.
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SCCM gives you depth and control
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for complex Windows and server scenarios.
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Intune gives you simplicity and cross-platform support
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for modern endpoints.
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But what if you need both?
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Co-management, running both at once.
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That's where Co-management comes in.
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It's Microsoft's supported model,
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where a single device runs under both SCCM
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and Intune at the same time, not either or, but both.
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Let's break down how this works.
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You enable Co-management on your SCCM managed devices.
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They enroll in Intune and now both tools
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manage them simultaneously.
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But you decide which tool handles which task.
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Microsoft calls these workloads sliders,
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think of them like a control panel with switches.
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For each category of management, compliance policies,
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device configuration, Windows updates,
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endpoint protection, application deployment,
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you slide the switch to either SCCM or Intune.
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That tool becomes the authority for that workload
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and the other tool steps back.
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For example, you could keep application deployment
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in SCCM because your complex deployments
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still need the depth but slide compliance policies
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to Intune for cloud-native conditional access integration.
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You could keep Windows updates in SCCM
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with your existing maintenance windows
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but slide endpoint protection to Intune
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so Defender policies live in the cloud.
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You decide workload by workload at your own pace.
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There's also a feature called tenant attach
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which surfaces your SCCM managed devices
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inside the Intune console.
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So even if you're not ready to move workloads,
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you can see all your devices in one place,
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run reports, take actions, and get that unified view
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without changing how anything works.
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This makes co-management a gradual migration path.
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Most organizations use it for 12 to 18 months,
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starting with the easy workloads like compliance
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and endpoint protection, then moving updates,
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then applications step-by-step workload by workload
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until Intune handles most of the load
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and SCCM only does what it does best.
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00:11:53,760 --> 00:11:56,360
And here's the thing that surprises a lot of people licensing.
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If you have Microsoft 365 e3 or e5,
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you usually already have rights to both SCCM and Intune
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so running both doesn't cost extra.
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The licensing is already covered.
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There's no financial reason not to use co-management
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if it makes sense for your environment.
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Co-management is the bridge letting you keep what works
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while moving towards what's next,
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but where you start depends entirely on your organization.
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Decision framework, which one should you use?
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So you've seen how both tools work, how they compare,
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and how co-management bridges the gap.
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The question now is simple, which one should you actually use?
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Let's break it down by scenario.
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Use SCCM if you have a large on-premises environment.
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If your organization has hundreds or thousands
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of Windows desktop's in offices connected to a corporate network
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with IT staff managing everything locally.
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If you need task sequences for OS deployment,
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imaging new machines, upgrading operating systems,
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handling complex build processes,
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or if you manage servers, patching, monitoring, inventory,
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if you require deep custom reporting
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that pulls data from SQL databases
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00:12:52,800 --> 00:12:54,600
and generates detailed compliance audits,
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SCCM is built for these scenarios.
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It's mature, proven, and gives you the control you need.
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On the other hand, use Intune if you're cloud-first.
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If your organization has already moved most of its infrastructure
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to the cloud or you're planning to.
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If you have a remote workforce working from home,
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coffee shops anywhere, if you need to manage mobile devices
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like iPhones, Android phones, iPads,
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if you're a smaller organization without dedicated IT infrastructure
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or the budget for on-premises servers.
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Intune gives you everything you need without the overhead.
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And for large enterprises migrating to the cloud,
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co-management is the bridge.
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If you have existing SCCM infrastructure and expertise
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but know the future is cloud-based, use co-management.
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If you need the depth of SCCM for some workloads
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like complex app deployments or server management,
383
00:13:38,840 --> 00:13:41,200
but want cloud flexibility for compliance policies
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or mobile device management, co-management lets you have both.
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Shifting workloads at your own pace.
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Here's a reality check.
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Intune can handle roughly 80 to 85%
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of typical device management scenarios.
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That's a lot.
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And for most organizations, Intune alone is enough,
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but that 15 to 20% gap matters if you need it.
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If you're in that gap, needing task sequences,
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00:13:59,680 --> 00:14:02,360
complex app dependencies, deep server management,
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00:14:02,360 --> 00:14:05,160
then SCCM or co-management is the right call.
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00:14:05,160 --> 00:14:07,480
A real example helps bring this to life.
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Real-world example.
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00:14:08,760 --> 00:14:10,160
A company's migration.
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00:14:10,160 --> 00:14:13,320
Picture a mid-sized company with 2,000 Windows desktops
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00:14:13,320 --> 00:14:14,920
and 500 mobile devices.
400
00:14:14,920 --> 00:14:16,840
They started with SCCM for everything
401
00:14:16,840 --> 00:14:18,360
and for years it worked well.
402
00:14:18,360 --> 00:14:20,440
The IT team knew that tool inside and out,
403
00:14:20,440 --> 00:14:22,800
deployments were controlled, patching was predictable,
404
00:14:22,800 --> 00:14:23,760
and life was good.
405
00:14:23,760 --> 00:14:25,360
But then remote work happened.
406
00:14:25,360 --> 00:14:27,080
Suddenly half the workforce was at home
407
00:14:27,080 --> 00:14:29,520
and those on-premises patching cycles stopped working.
408
00:14:29,520 --> 00:14:30,920
Devices that never left the office
409
00:14:30,920 --> 00:14:32,720
were now scattered across the city.
410
00:14:32,720 --> 00:14:34,640
VPN connections were slow,
411
00:14:34,640 --> 00:14:36,160
and maintenance windows didn't apply
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00:14:36,160 --> 00:14:37,960
when machines were turned off at night.
413
00:14:37,960 --> 00:14:39,400
The old model was breaking.
414
00:14:39,400 --> 00:14:41,240
They didn't rip out SCCM overnight.
415
00:14:41,240 --> 00:14:44,160
Instead, they spent 14 months implementing co-management.
416
00:14:44,160 --> 00:14:47,160
First, they moved mobile device management to Intune,
417
00:14:47,160 --> 00:14:49,320
all 500 iPhones and Android devices
418
00:14:49,320 --> 00:14:50,720
now managed from the cloud.
419
00:14:50,720 --> 00:14:52,480
Next came compliance policies.
420
00:14:52,480 --> 00:14:54,200
Devices had to meet security standards
421
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before accessing company data enforced through conditional access.
422
00:14:57,520 --> 00:14:59,280
Then they moved Windows updates.
423
00:14:59,280 --> 00:15:01,080
Update rings replaced maintenance windows
424
00:15:01,080 --> 00:15:03,760
and devices checked directly with Microsoft servers
425
00:15:03,760 --> 00:15:06,680
instead of the on-premises WSUs infrastructure.
426
00:15:06,680 --> 00:15:09,440
But they kept task sequences in SCCM for situations
427
00:15:09,440 --> 00:15:11,240
like deploying a custom operating system
428
00:15:11,240 --> 00:15:12,960
image to a lab full of machines.
429
00:15:12,960 --> 00:15:15,200
They also kept complex app deployments there.
430
00:15:15,200 --> 00:15:16,600
The line of business applications
431
00:15:16,600 --> 00:15:18,920
with custom scripts and multiple dependencies,
432
00:15:18,920 --> 00:15:20,720
those stayed where the depth was.
433
00:15:20,720 --> 00:15:21,680
By the time they finished,
434
00:15:21,680 --> 00:15:24,520
server infrastructure costs were down by 60%.
435
00:15:24,520 --> 00:15:26,200
They decommissioned distribution points,
436
00:15:26,200 --> 00:15:28,120
management points and SQL servers.
437
00:15:28,120 --> 00:15:30,520
The remote worker experience improved dramatically.
438
00:15:30,520 --> 00:15:33,400
Devices got updates and policies without needing a VPN
439
00:15:33,400 --> 00:15:34,720
and they still had deep control
440
00:15:34,720 --> 00:15:36,960
for the legacy applications that required it.
441
00:15:36,960 --> 00:15:38,960
That's the pattern more organizations are following.
442
00:15:38,960 --> 00:15:40,240
Not a sudden switch,
443
00:15:40,240 --> 00:15:42,640
but a gradual workload by workload migration.
444
00:15:42,640 --> 00:15:43,920
Co-management is the bridge
445
00:15:43,920 --> 00:15:46,040
and the destination is a modern cloud-connected
446
00:15:46,040 --> 00:15:47,920
endpoint management strategy.
447
00:15:47,920 --> 00:15:49,360
So here's what you need to remember.
448
00:15:49,360 --> 00:15:52,680
SCCM and Intune solve the same problem in very different ways
449
00:15:52,680 --> 00:15:55,360
on premises depth versus cloud simplicity.
450
00:15:55,360 --> 00:15:58,000
Agent-based control versus profile-based flexibility.
451
00:15:58,000 --> 00:15:59,600
One is a 20-year veteran.
452
00:15:59,600 --> 00:16:01,680
The other is the future Microsoft is building.
453
00:16:01,680 --> 00:16:03,560
Intune is the direction things are heading,
454
00:16:03,560 --> 00:16:05,240
but SCCM is in dead.
455
00:16:05,240 --> 00:16:08,000
It's still the right tool for complex Windows environments,
456
00:16:08,000 --> 00:16:09,760
server management and organizations
457
00:16:09,760 --> 00:16:11,160
that need deep control.
458
00:16:11,160 --> 00:16:12,920
And Co-management gives you both,
459
00:16:12,920 --> 00:16:16,200
a gradual path from one to the other at your own pace.
460
00:16:16,200 --> 00:16:17,280
Here's your homework.
461
00:16:17,280 --> 00:16:18,560
Look at your current environment
462
00:16:18,560 --> 00:16:21,760
and identify one workload you could move to Intune this month.
463
00:16:21,760 --> 00:16:23,160
Start with something simple.
464
00:16:23,160 --> 00:16:25,680
Compliance policies may be a mobile device management.
465
00:16:25,680 --> 00:16:26,520
Try it.
466
00:16:26,520 --> 00:16:27,360
See how it feels.
467
00:16:27,360 --> 00:16:28,800
You don't have to move everything at once.
468
00:16:28,800 --> 00:16:30,800
If this episode helped you understand the difference
469
00:16:30,800 --> 00:16:33,520
between SCCM and Intune, please subscribe to the channel.
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00:16:33,520 --> 00:16:35,720
We break down Microsoft's endpoint management options
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00:16:35,720 --> 00:16:38,280
in plain English, one knowledge nugget at a time.
Founder of m365.fm, m365.show and m365con.net
Mirko Peters is a Microsoft 365 expert, content creator, and founder of m365.fm, a platform dedicated to sharing practical insights on modern workplace technologies. His work focuses on Microsoft 365 governance, security, collaboration, and real-world implementation strategies.
Through his podcast and written content, Mirko provides hands-on guidance for IT professionals, architects, and business leaders navigating the complexities of Microsoft 365. He is known for translating complex topics into clear, actionable advice, often highlighting common mistakes and overlooked risks in real-world environments.
With a strong emphasis on community contribution and knowledge sharing, Mirko is actively building a platform that connects experts, shares experiences, and helps organizations get the most out of their Microsoft 365 investments.